PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_94412g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family GeBP
Protein Properties Length: 466aa    MW: 52795.5 Da    PI: 6.0058
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_94412g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57332.32.8e-10133224597
         DUF573   5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk...aksgke.psfskehdqkifelskkiW 96 
                    + ws eDei+l  +++   a  g   + +++afye +k+ ++++ s+ q+ eK+rr++ +f + +++   ak  ++ +  ++ h+ + +++ k+iW
  MA_94412g0010 133 KKWSAEDEISLANAVLASSA--G--GQVNMTAFYERAKETLQSE-SHGQIYEKMRRMRSRFWTIESQlrdAKIAEDfFPYRSMHEADLYKVWKQIW 223
                    67*************98744..3..3468*************98.789*************9998886554433441457899************* PP

         DUF573  97 g 97 
                    g
  MA_94412g0010 224 G 224
                    8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.1E-13133224IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MSSSALPSSS DDGDARSHAK PNSTPPTKSS AASSDSEPKT PRRSSVMKKS RDGSRPDTRV  60
WPKQSRDRLE AKLPASKKKK NSRKTGVSGN KSQIDIEELL AQTYPKEPSV LGDETHITNG  120
LEMPSEHAKD TAKKWSAEDE ISLANAVLAS SAGGQVNMTA FYERAKETLQ SESHGQIYEK  180
MRRMRSRFWT IESQLRDAKI AEDFFPYRSM HEADLYKVWK QIWGRHERRN EAAQDIEMEQ  240
NRELRSRSHA RQVHNGDVNE DRHESRTEAA HMNGEPRSHS HAMQRQNGEV TDDPPEEEEE  300
EEEEEHQQAE EEDNVVETAG KTPSRVACNH DEEFNLIQTE IKALVCKVKN NVQTMLDDTE  360
AKMEGLIDSL FKRAVVAAQV QSLGSEVGIG SCLCSSLSRR MKELECVRSV REFPGLNEAE  420
AKILQQKWRK HQIEELRTFS GRLELLQEEC KLCIKDLETA NSSHNS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1223380.0BT122338.1 Picea sitchensis clone WS0443_M10 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5A8570.0D5A857_PICSI; Putative uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.23e-06DNA-binding storekeeper protein-related transcriptional regulator